Parallel computing for bioinformatics and computational biology
[Book]
:models, enabling technologies, and case studies
/ edited by Albert Y. Zomaya
Hoboken, N.J.
: Wiley-Interscience
, 2006.
xxix, 782 p. , ill. , 25 cm.
(Wiley series on parallel and distributed computing.)
Electronic
Includes bibliographical references and index.
Parallel and evolutionary approaches to computational biology /Nouhad Rizk --Parallel Monte Carlo simulation of HIV molecular evolution in response to immune surveillance /Jack da Silva --Differential evolutionary algorithms for in vivo dynamic analysis of glycolysis and pentose phosphate pathway in Escherichia coli /Andrei Doncescu --Compute-intensive simulations for cellular models /Kevin Burrage --Parallel computation in simulating diffusion and deformation in human brain /Jun Zhang --Computational molecular biology /Azzedine Boukerche --Special-purpose computing for biological sequence analysis /Bertil Schmidt --Multiple sequence alignment in parallel on a cluster of workstations /Amitava Datta --Searching sequence databases using high performance BLASTs /Xue Wu --Parallel implementations of local sequence alignment: hardware and software /Vipin Chaudhary --Parallel computing in the analysis of gene expression relationships /Robert Martino --Parallel algorithms for solving the fragment assembly problem in DNA strands /Enrique Alba --A cooperative genetic algorithm for knowledge discovery in microarray experiments /Mohammad Khabzaoui --Parallel and distributed computation of large phylogenetic trees /Alexandros P. Stamatakis --Phylogenetic parameter estimation on COWs /Ekkehard Petzold --High-performance phylogeny reconstruction under maximum parsimony /Tiffani Williams --Protein folding with the parallel replica exchange molecular dynamics method /Ruhong Zhou --High performance alignment methods for protein threading /R. Andonov --Parallel evolutionary computations in discerning protein structures /Richard O. Day --A brief Overview of Grid activities for bioinformatics and health applications /Ali Al Mazari --Parallel algorithms for bioinformatics /Shahid H. Bokhari --Cluster and grid infrastructure for computational chemistry and biochemistry /Kim K. Baldridge --Distributed workflows in bioinformatics /Arun Krishnan --Molecular structure determination on a computational and data grid /Russ Miller --GIPSY : a problem solving environment for bioinformatics applications /Rajendra R. Joshi --TaskSpaces : a software framework for parallel bioinformatics on computational grids /Hans De Sterck --The organic grid : self-organizing computation on desktop grids /Arjav J. Chakrvarti --FPGA Computing in modern bioinformatics /H. Simmler --Virtual microscopy : distributed image storage, retrieval, analysis, and visualization /T. Pan.
Bioinformatics
Computational biology
Parallel processing (Electronic computers)
Computational Biology
Computing Methodologies
QH324
.
2
.
P37
2006
Zomaya, Albert Y
ایران
Parallel computing for bioinformatics and computational biology